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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00852Hypothetical protein; COG: COG0609 ABC-type Fe3+-siderophore transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (336 aa)    
Predicted Functional Partners:
CKO_00850
Hypothetical protein; KEGG: eca:ECA4254 1.8e-61 putative iron(III) ABC transporter ATP-binding protein K02013; COG: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; Psort location: Cytoplasmic, score:9.12.
 
   0.971
CKO_00851
Hypothetical protein; COG: COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
   0.962
hmuV
Hypothetical protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 
 0.919
CKO_02655
Hypothetical protein; COG: COG4558 ABC-type hemin transport system, periplasmic component; Psort location: Periplasmic, score:9.76.
 
 
 0.853
CKO_01265
Hypothetical protein; KEGG: bmf:BAB2_0485 8.9e-76 ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase K02013; COG: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
  
   0.851
hmuV-2
Hypothetical protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
  
   0.846
CKO_00919
Hypothetical protein; COG: COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
   0.832
CKO_03217
Hypothetical protein; KEGG: stm:STM0192 1.1e-130 fhuC; ABC superfamily (atp_bind), hydroxymate-dependent iron transport K02013; COG: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
  
   0.821
CKO_03741
Hypothetical protein; COG: COG4558 ABC-type hemin transport system, periplasmic component.
 
 
 0.804
CKO_02573
Hypothetical protein; KEGG: eci:UTI89_C0590 5.5e-131 fepC; ferric enterobactin transport ATP-binding protein FepC K02013; COG: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; Psort location: Cytoplasmic, score:9.12.
  
   0.788
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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