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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00867Hypothetical protein; KEGG: rha:RHA1_ro06103 2.1e-198 non-ribosomal peptide synthetase K01779:K01897; COG: COG1020 Non-ribosomal peptide synthetase modules and related proteins; Psort location: CytoplasmicMembrane, score:8.46. (1598 aa)    
Predicted Functional Partners:
CKO_00868
Hypothetical protein; KEGG: ava:Ava_4834 7.6e-205 beta-ketoacyl synthase K01845; COG: COG3321 Polyketide synthase modules and related proteins; Psort location: Cytoplasmic, score:9.26.
     0.984
CKO_00874
Hypothetical protein; KEGG: ava:Ava_4834 1.6e-101 beta-ketoacyl synthase K01845; COG: COG3321 Polyketide synthase modules and related proteins; Psort location: Cytoplasmic, score:9.26.
 0.955
CKO_00860
Hypothetical protein; KEGG: ava:Ava_4834 7.3e-125 beta-ketoacyl synthase K01845; COG: COG3321 Polyketide synthase modules and related proteins; Psort location: Cytoplasmic, score:9.26.
 
     0.935
CKO_00876
Hypothetical protein; KEGG: eci:UTI89_C2207 9.8e-102 putative thioesterase K01076; COG: COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis; Psort location: Cytoplasmic, score:8.96.
 
  
 0.816
CKO_00863
Hypothetical protein; KEGG: ecp:ECP_1976 3.3e-37 putative D-alanyl carrier protein K03367; Psort location: Cytoplasmic, score:8.96.
 
 
 0.773
CKO_00907
Hypothetical protein; KEGG: eci:UTI89_C2186 2.1e-138 ybtT; YbtT protein K05374; COG: COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis.
 
  
 0.773
CKO_01245
Hypothetical protein; KEGG: eci:UTI89_C2186 2.1e-138 ybtT; YbtT protein K05374; COG: COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis.
 
  
 0.773
CKO_00910
Hypothetical protein; KEGG: eci:UTI89_C2184 2.6e-16 irp1; HMWP1 nonribosomal peptide/polyketide synthase K04786; COG: COG3433 Aryl carrier domain; Psort location: Cytoplasmic, score:8.96.
  
     0.765
CKO_00857
Hypothetical protein; KEGG: syn:slr0495 6.5e-18 lipopeptide antibiotics iturin a biosynthesis protein K01005; COG: COG2091 Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
 
  
 0.757
CKO_00866
Hypothetical protein; KEGG: ecp:ECP_1974 1.0e-223 putative malonyl-CoA transacylase K00645; COG: COG0331 (acyl-carrier-protein) S-malonyltransferase; Psort location: Cytoplasmic, score:8.96.
   
 0.721
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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