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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00871Hypothetical protein; KEGG: eci:UTI89_C2212 1.0e-264 putative amidase K01426; COG: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases. (487 aa)    
Predicted Functional Partners:
acyP
Hypothetical protein; KEGG: stm:STM1083 1.2e-39 yccX; putative phosphohydrolase K01512; COG: COG1254 Acylphosphatases; Psort location: Cytoplasmic, score:8.96.
    
  0.911
CKO_00870
Hypothetical protein; KEGG: eci:UTI89_C2214 0. putative peptide synthetase K01932; COG: COG3321 Polyketide synthase modules and related proteins.
 
 
 
 0.903
CKO_00869
Hypothetical protein; KEGG: eci:UTI89_C2214 0. putative peptide synthetase K01932; COG: COG1020 Non-ribosomal peptide synthetase modules and related proteins; Psort location: CytoplasmicMembrane, score:8.46.
 
 
 
 0.866
aspS
Hypothetical protein; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
  
 
 0.851
CKO_00873
Hypothetical protein; KEGG: eci:UTI89_C2210 0. putative peptide synthetase K03367; COG: COG1020 Non-ribosomal peptide synthetase modules and related proteins; Psort location: Cytoplasmic, score:9.97; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 
 0.843
CKO_00614
Hypothetical protein; KEGG: stt:t0649 1.6e-163 fruK; 1-phosphofructokinase K00882; COG: COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Psort location: Cytoplasmic, score:9.26; Belongs to the carbohydrate kinase PfkB family.
   
    0.819
CKO_01748
Hypothetical protein; KEGG: stm:STM1326 2.9e-148 pfkB; 6-phosphofructokinase II K00850; COG: COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Psort location: Cytoplasmic, score:9.26; Belongs to the carbohydrate kinase PfkB family.
   
    0.819
ftsZ
Hypothetical protein; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
   
    0.815
pyrB
Hypothetical protein; KEGG: sec:SC4315 1.4e-157 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609; COG: COG0540 Aspartate carbamoyltransferase, catalytic chain; Psort location: Cytoplasmic, score:9.97; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
    0.812
asnS
Hypothetical protein; KEGG: sdy:SDY_2327 1.2e-247 asnS; asparagine tRNA synthetase K01893; COG: COG0017 Aspartyl/asparaginyl-tRNA synthetases; Psort location: Cytoplasmic, score:10.00.
   
 
 0.808
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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