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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00873Hypothetical protein; KEGG: eci:UTI89_C2210 0. putative peptide synthetase K03367; COG: COG1020 Non-ribosomal peptide synthetase modules and related proteins; Psort location: Cytoplasmic, score:9.97; Belongs to the ATP-dependent AMP-binding enzyme family. (1455 aa)    
Predicted Functional Partners:
CKO_00874
Hypothetical protein; KEGG: ava:Ava_4834 1.6e-101 beta-ketoacyl synthase K01845; COG: COG3321 Polyketide synthase modules and related proteins; Psort location: Cytoplasmic, score:9.26.
 0.946
CKO_00868
Hypothetical protein; KEGG: ava:Ava_4834 7.6e-205 beta-ketoacyl synthase K01845; COG: COG3321 Polyketide synthase modules and related proteins; Psort location: Cytoplasmic, score:9.26.
     0.902
CKO_00872
Hypothetical protein; KEGG: tfu:Tfu_2682 0.0012 proton-translocating NADH-quinone oxidoreductase, chain N K00343; COG: COG0534 Na+-driven multidrug efflux pump; Psort location: CytoplasmicMembrane, score:10.00.
 
     0.891
CKO_00875
Hypothetical protein; KEGG: eci:UTI89_C2208 1.6e-259 hypothetical protein K01286; COG: COG1680 Beta-lactamase class C and other penicillin binding proteins; Psort location: CytoplasmicMembrane, score:9.86.
 
     0.862
CKO_00871
Hypothetical protein; KEGG: eci:UTI89_C2212 1.0e-264 putative amidase K01426; COG: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases.
 
 
 
 0.843
CKO_00876
Hypothetical protein; KEGG: eci:UTI89_C2207 9.8e-102 putative thioesterase K01076; COG: COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis; Psort location: Cytoplasmic, score:8.96.
 
  
 0.835
CKO_00863
Hypothetical protein; KEGG: ecp:ECP_1976 3.3e-37 putative D-alanyl carrier protein K03367; Psort location: Cytoplasmic, score:8.96.
 
 
 0.827
CKO_00860
Hypothetical protein; KEGG: ava:Ava_4834 7.3e-125 beta-ketoacyl synthase K01845; COG: COG3321 Polyketide synthase modules and related proteins; Psort location: Cytoplasmic, score:9.26.
 
     0.802
CKO_00909
Hypothetical protein; KEGG: eci:UTI89_C2184 0. irp1; HMWP1 nonribosomal peptide/polyketide synthase K04786; COG: COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases.
  
     0.771
CKO_01247
Hypothetical protein; KEGG: eci:UTI89_C2184 0. irp1; HMWP1 nonribosomal peptide/polyketide synthase K04786; COG: COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases.
  
     0.771
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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