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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00889Hypothetical protein; COG: COG2948 Type IV secretory pathway, VirB10 components. (414 aa)    
Predicted Functional Partners:
CKO_00890
Hypothetical protein; COG: COG3504 Type IV secretory pathway, VirB9 components.
 
 
 0.999
CKO_00891
Hypothetical protein; COG: COG3736 Type IV secretory pathway, component VirB8.
 
  
 0.991
CKO_00896
Hypothetical protein; COG: COG3451 Type IV secretory pathway, VirB4 components.
 
  
 0.984
CKO_00893
Hypothetical protein; COG: COG3704 Type IV secretory pathway, VirB6 components; Psort location: CytoplasmicMembrane, score:10.00.
  
  
 0.942
CKO_00897
Hypothetical protein; COG: NOG22876 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.50.
  
  
 0.938
CKO_00898
Hypothetical protein; COG: NOG17192 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
   
 0.917
CKO_03479
Hypothetical protein; COG: NOG06090 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
  
 0.868
CKO_03480
Hypothetical protein; COG: NOG06090 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
  
 0.868
CKO_00886
Hypothetical protein; Part of the Type IV secretion system. Belongs to the GSP E family.
 
   
 0.812
CKO_02972
Hypothetical protein; KEGG: sty:STY0281 3.2e-229 mltD; membrane-bound lytic murein transglycosylase d precursor K08307; COG: COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
   
 
 0.759
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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