STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00892Hypothetical protein. (50 aa)    
Predicted Functional Partners:
CKO_00890
Hypothetical protein; COG: COG3504 Type IV secretory pathway, VirB9 components.
       0.773
CKO_00891
Hypothetical protein; COG: COG3736 Type IV secretory pathway, component VirB8.
       0.773
CKO_00889
Hypothetical protein; COG: COG2948 Type IV secretory pathway, VirB10 components.
       0.636
CKO_00893
Hypothetical protein; COG: COG3704 Type IV secretory pathway, VirB6 components; Psort location: CytoplasmicMembrane, score:10.00.
       0.563
CKO_00894
Hypothetical protein.
       0.563
CKO_00895
Hypothetical protein; COG: NOG13363 non supervised orthologous group.
       0.563
CKO_00896
Hypothetical protein; COG: COG3451 Type IV secretory pathway, VirB4 components.
       0.535
CKO_00897
Hypothetical protein; COG: NOG22876 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.50.
       0.525
CKO_00898
Hypothetical protein; COG: NOG17192 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
       0.525
CKO_00899
Hypothetical protein; COG: NOG33328 non supervised orthologous group.
       0.400
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.