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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00903Hypothetical protein; COG: COG3311 Predicted transcriptional regulator. (61 aa)    
Predicted Functional Partners:
CKO_03944
Hypothetical protein; COG: COG0582 Integrase; Belongs to the 'phage' integrase family.
 
  
 0.755
CKO_02950
Hypothetical protein; COG: COG0582 Integrase.
 
   
 0.741
CKO_03532
Hypothetical protein; COG: COG0582 Integrase; Psort location: Cytoplasmic, score:8.96; Belongs to the 'phage' integrase family.
 
   
 0.733
CKO_00953
Hypothetical protein; COG: COG0582 Integrase; Belongs to the 'phage' integrase family.
 
   
 0.726
CKO_00917
Hypothetical protein; COG: COG0582 Integrase; Belongs to the 'phage' integrase family.
 
   
 0.725
CKO_00902
Hypothetical protein; COG: NOG11459 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
       0.509
CKO_03479
Hypothetical protein; COG: NOG06090 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
     0.487
CKO_00904
Hypothetical protein; COG: NOG32955 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
       0.486
CKO_02288
Hypothetical protein; KEGG: eci:UTI89_C0121 1.3e-41 usp; uropathogenic specific protein K01150; COG: NOG14030 non supervised orthologous group.
  
    0.462
CKO_03866
Hypothetical protein; KEGG: eci:UTI89_C0121 6.4e-50 usp; uropathogenic specific protein K01150; COG: NOG14030 non supervised orthologous group.
  
    0.452
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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