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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00931Hypothetical protein; KEGG: ftf:FTF1000c 2.1e-28 cobS; cobalamin (vitamin B12) synthesis protein/P47K family protein; COG: COG0523 Putative GTPases (G3E family); Psort location: Cytoplasmic, score:8.96. (399 aa)    
Predicted Functional Partners:
folE2
Hypothetical protein; Converts GTP to 7,8-dihydroneopterin triphosphate.
 
  
 0.800
CKO_00932
COG: COG1734 DnaK suppressor protein; Psort location: Cytoplasmic, score:8.96.
  
  
 0.768
CKO_00607
Hypothetical protein; KEGG: reh:H16_A3373 5.1e-17 putative GTPase (G3E family); COG: COG0523 Putative GTPases (G3E family); Psort location: Cytoplasmic, score:8.96.
  
     0.764
rpsN
Hypothetical protein; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
 
 0.695
CKO_00930
Hypothetical protein; COG: COG0735 Fe2+/Zn2+ uptake regulation proteins; Psort location: Cytoplasmic, score:8.96; Belongs to the Fur family.
 
   
 0.678
CKO_02562
Hypothetical protein; COG: COG2879 Uncharacterized small protein; Psort location: Cytoplasmic, score:8.96.
  
  
 0.649
CKO_03444
Hypothetical protein; COG: COG2879 Uncharacterized small protein.
  
  
 0.649
CKO_00928
KEGG: bld:BLi00763 4.2e-69 hypothetical protein K00100; COG: COG0492 Thioredoxin reductase.
 
   0.637
map
Hypothetical protein; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
    
   0.578
rpmG
COG: COG0267 Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
 
  
 0.555
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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