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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00939Hypothetical protein; KEGG: rru:Rru_A2894 8.9e-76 ABC transporter component K02074; COG: COG1121 ABC-type Mn/Zn transport systems, ATPase component. (273 aa)    
Predicted Functional Partners:
CKO_00937
Hypothetical protein; COG: COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.989
CKO_00938
Hypothetical protein; COG: COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
  
  0.989
CKO_00940
Hypothetical protein; COG: COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; Psort location: CytoplasmicMembrane, score:8.60; Belongs to the bacterial solute-binding protein 9 family.
 
  
  0.989
CKO_04090
Hypothetical protein; COG: COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; Psort location: CytoplasmicMembrane, score:8.60; Belongs to the bacterial solute-binding protein 9 family.
 
  
  0.954
CKO_04092
Hypothetical protein; COG: COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.953
CKO_04093
Hypothetical protein; COG: COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.953
CKO_04091
Hypothetical protein; KEGG: rru:Rru_A2894 6.0e-86 ABC transporter component K02074; COG: COG1121 ABC-type Mn/Zn transport systems, ATPase component; Psort location: Cytoplasmic, score:9.12.
  
  
 
0.902
CKO_00936
Hypothetical protein; COG: NOG10019 non supervised orthologous group.
   
   0.757
CKO_00949
Hypothetical protein; COG: COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; Psort location: CytoplasmicMembrane, score:8.02; Belongs to the bacterial solute-binding protein 9 family.
 
     0.710
CKO_04052
Hypothetical protein; COG: COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; Psort location: CytoplasmicMembrane, score:8.60; Belongs to the bacterial solute-binding protein 9 family.
 
     0.620
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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