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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00948Hypothetical protein; COG: NOG07584 non supervised orthologous group. (421 aa)    
Predicted Functional Partners:
macB
Hypothetical protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.846
CKO_00949
Hypothetical protein; COG: COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; Psort location: CytoplasmicMembrane, score:8.02; Belongs to the bacterial solute-binding protein 9 family.
  
 0.773
CKO_01933
Hypothetical protein; COG: COG4591 ABC-type transport system, involved in lipoprotein release, permease component; Psort location: CytoplasmicMembrane, score:10.00.
  
 
 0.768
CKO_01935
Hypothetical protein; KEGG: cch:Cag_0337 3.2e-06 ATPase K06020; COG: COG4591 ABC-type transport system, involved in lipoprotein release, permease component; Psort location: CytoplasmicMembrane, score:10.00.
  
 
 0.768
CKO_02053
Hypothetical protein; KEGG: pen:PSEEN3665 3.9e-12 efflux ABC transporter, ATP-binding/permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
  
 
 0.768
CKO_02054
Hypothetical protein; KEGG: cch:Cag_0337 3.2e-16 ATPase K06020; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
  
 
 0.768
CKO_00942
Hypothetical protein; COG: NOG26672 non supervised orthologous group.
  
     0.713
CKO_00891
Hypothetical protein; COG: COG3736 Type IV secretory pathway, component VirB8.
  
     0.706
CKO_00889
Hypothetical protein; COG: COG2948 Type IV secretory pathway, VirB10 components.
  
   
 0.702
CKO_00930
Hypothetical protein; COG: COG0735 Fe2+/Zn2+ uptake regulation proteins; Psort location: Cytoplasmic, score:8.96; Belongs to the Fur family.
 
  
 0.700
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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