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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00978Hypothetical protein; COG: COG2375 Siderophore-interacting protein. (298 aa)    
Predicted Functional Partners:
CKO_02566
Hypothetical protein; KEGG: spt:SPA2137 1.4e-143 entB; isochorismatase K01252; COG: COG3433 Aryl carrier domain; Psort location: Cytoplasmic, score:8.96.
  
  
 0.865
CKO_02567
Hypothetical protein; KEGG: eci:UTI89_C0596 6.5e-263 entE; enterobactin synthetase component E K02363; COG: COG1021 Peptide arylation enzymes; Psort location: Cytoplasmic, score:9.97.
  
  
 0.776
CKO_00976
Hypothetical protein; KEGG: aci:ACIAD2291 0.0069 cydB; cytochrome d terminal oxidase polypeptide subunit II K00426; COG: NOG06795 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:10.00.
       0.742
CKO_02575
Hypothetical protein; KEGG: stm:STM0588 0. entF; enterobactin synthetase, component F (nonribosomal peptide synthetase) K02364; COG: COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases; Psort location: CytoplasmicMembrane, score:8.46.
  
  
 0.657
CKO_00975
Hypothetical protein.
       0.539
zupT
Hypothetical protein; Mediates zinc uptake. May also transport other divalent cations; Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily.
   
    0.481
CKO_02154
COG: COG3214 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.96.
  
     0.475
CKO_00024
Hypothetical protein; KEGG: cal:orf19.201 5.6e-06 CDC47; DNA helicase and DNA replication licensing factor K02210; COG: COG2149 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.443
CKO_03740
Hypothetical protein; COG: COG3720 Putative heme degradation protein; Psort location: Cytoplasmic, score:8.96.
  
    0.442
entH
Hypothetical protein; Required for optimal enterobactin synthesis. Acts as a proofreading enzyme that prevents EntB misacylation by hydrolyzing the thioester bound existing between EntB and wrongly charged molecules. Belongs to the thioesterase PaaI family.
  
    0.433
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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