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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00980Hypothetical protein; COG: COG1418 Predicted HD superfamily hydrolase. (231 aa)    
Predicted Functional Partners:
CKO_00982
Hypothetical protein; May nick specific sequences that contain T:G mispairs resulting from m5C-deamination.
       0.615
CKO_00981
Hypothetical protein; KEGG: stm:STM1992 1.4e-228 dcm; DNA cytosine methylase K00558; COG: COG0270 Site-specific DNA methylase; Psort location: Cytoplasmic, score:8.96.
       0.583
CKO_00999
Hypothetical protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.535
CKO_01059
COG: COG1360 Flagellar motor protein.
    
   0.535
CKO_02854
COG: COG1360 Flagellar motor protein; Psort location: CytoplasmicMembrane, score:8.02.
    
   0.535
CKO_02858
Hypothetical protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.535
pnp
Hypothetical protein; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
  
 
 0.522
rpsO
Hypothetical protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.
  
  
 0.483
pfkA
Hypothetical protein; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
  
 
 0.464
ftsZ
Hypothetical protein; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
 
   
 0.448
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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