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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00997Hypothetical protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. (137 aa)    
Predicted Functional Partners:
CKO_00998
Hypothetical protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
 0.999
CKO_01004
Hypothetical protein; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
 0.998
CKO_02896
Hypothetical protein; COG: COG1536 Flagellar motor switch protein; Psort location: Cytoplasmic, score:9.12.
 
 0.996
fliQ
Hypothetical protein; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
  
 0.993
fliP
Hypothetical protein; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
  
 0.992
CKO_01002
Hypothetical protein; KEGG: sec:SC1977 2.5e-229 fliI; flagellum-specific ATP synthase K02412; COG: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; Psort location: Cytoplasmic, score:8.96.
 
 
 0.992
CKO_01003
Hypothetical protein; COG: COG1317 Flagellar biosynthesis/type III secretory pathway protein.
 
 
 0.992
CKO_00993
Hypothetical protein; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
 
 
 0.990
CKO_02900
Hypothetical protein; COG: NOG26448 non supervised orthologous group.
  
 0.989
CKO_02894
Hypothetical protein; KEGG: ypa:YPA_3072 3.1e-176 putative flagellum-specific ATP synthase K02412; COG: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase.
 
 
 0.985
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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