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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01003Hypothetical protein; COG: COG1317 Flagellar biosynthesis/type III secretory pathway protein. (234 aa)    
Predicted Functional Partners:
CKO_00997
Hypothetical protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
 
 
 0.992
CKO_01001
Hypothetical protein; Flagellar protein that affects chemotactic events. Belongs to the FliJ family.
 
  
 0.992
CKO_01002
Hypothetical protein; KEGG: sec:SC1977 2.5e-229 fliI; flagellum-specific ATP synthase K02412; COG: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; Psort location: Cytoplasmic, score:8.96.
 
 
 0.992
CKO_01000
Hypothetical protein; KEGG: reh:H16_A2389 0.0032 dnaX; DNA polymerase III tau/gamma subunit K00961; COG: COG3144 Flagellar hook-length control protein.
 
  
 0.991
CKO_01005
Hypothetical protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.991
CKO_01004
Hypothetical protein; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
 
 0.990
CKO_00998
Hypothetical protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
 
 0.987
CKO_00999
Hypothetical protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.982
fliE
Hypothetical protein; COG: COG1677 Flagellar hook-basal body protein.
 
  
 0.980
CKO_00996
Hypothetical protein; COG: COG3190 Flagellar biogenesis protein.
 
  
 0.974
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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