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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01009Hypothetical protein; COG: COG2391 Predicted transporter component; Psort location: CytoplasmicMembrane, score:10.00. (401 aa)    
Predicted Functional Partners:
CKO_01008
COG: COG0425 Predicted redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family.
 
  
 0.994
tusA
Hypothetical protein; Sulfur carrier protein involved in sulfur trafficking in the cell. Part of a sulfur-relay system required for 2-thiolation during synthesis of 2-thiouridine of the modified wobble base 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) in tRNA. Interacts with IscS and stimulates its cysteine desulfurase activity. Accepts an activated sulfur from IscS, which is then transferred to TusD, and thus determines the direction of sulfur flow from IscS to 2-thiouridine formation. Also appears to be involved in sulfur transfer for the biosynthesis of molybdopterin.
  
  
 0.670
CKO_05027
Hypothetical protein; KEGG: lpl:lp_2645 0.00014 acm2; muramidase K01185; COG: COG2992 Uncharacterized FlgJ-related protein.
  
     0.592
CKO_01465
Hypothetical protein; KEGG: bfl:Bfl281 6.5e-05 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536; COG: NOG06285 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
     0.538
CKO_01489
COG: COG3238 Uncharacterized protein conserved in bacteria; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.530
CKO_01288
Hypothetical protein; COG: COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction.
 
    0.521
CKO_01010
Hypothetical protein; KEGG: plu:plu1239 0.0072 dinP; DNA polymerase IV (DNA-damage-inducible protein P) K02346; COG: NOG09020 non supervised orthologous group.
       0.505
CKO_05046
Hypothetical protein; KEGG: eci:UTI89_C4132 3.2e-286 selB; selenocysteine-specific elongation factor K03833; COG: COG3276 Selenocysteine-specific translation elongation factor.
 
   
 0.484
CKO_01557
Hypothetical protein; KEGG: cyb:CYB_1279 0.0028 NADH-ubiquinone/plastoquinone oxidoreductase, subunit 6 K05578; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.456
CKO_01374
Hypothetical protein; COG: COG2128 Uncharacterized conserved protein.
  
    0.454
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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