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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01016Hypothetical protein; KEGG: dme:Dmel_CG10392 1.9e-36 Ogt; O-glycosyltransferase K00754; COG: COG3914 Predicted O-linked N-acetylglucosamine transferase, SPINDLY family. (1090 aa)    
Predicted Functional Partners:
htpG
Hypothetical protein; Molecular chaperone. Has ATPase activity.
   
 0.835
CKO_02907
COG: COG4461 Uncharacterized protein conserved in bacteria, putative lipoprotein.
   
 0.818
alaS
Hypothetical protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 0.816
betA
Hypothetical protein; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
    
 0.772
rpoA
Hypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.757
rpoB
Hypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.755
CKO_04977
Hypothetical protein; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose.
  
 
 0.752
rpoZ
Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
  0.705
CKO_00519
Hypothetical protein; KEGG: stm:STM2317 5.7e-271 nuoM; NADH dehydrogenase I chain M K00342; COG: COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); Psort location: CytoplasmicMembrane, score:10.00.
   
 
 0.689
CKO_04829
Hypothetical protein; KEGG: bur:Bcep18194_A5099 1.2e-245 RNA binding S1; COG: COG2183 Transcriptional accessory protein; Psort location: Cytoplasmic, score:8.96.
    
 0.655
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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