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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgsAHypothetical protein; This protein catalyzes the committed step to the synthesis of the acidic phospholipids; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (182 aa)    
Predicted Functional Partners:
CKO_03191
Hypothetical protein; KEGG: ecj:JW5810 2.5e-151 cdsA; CDP-diglyceride synthase K00981; COG: COG0575 CDP-diglyceride synthetase; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.951
CKO_02743
Hypothetical protein; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
 
  
 0.947
CKO_00199
Hypothetical protein; KEGG: spt:SPA0265 5.2e-238 pssA; CDP-diacylglycerol-serine O-phosphatidyltransferase K00998; COG: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; Psort location: Cytoplasmic, score:8.96.
    
 0.927
CKO_01361
Hypothetical protein; KEGG: sty:STY1341 3.7e-125 pgpB; phosphatidylglycerophosphatase B K01096; COG: COG0671 Membrane-associated phospholipid phosphatase; Psort location: CytoplasmicMembrane, score:10.00.
  
 
 0.919
CKO_00223
Hypothetical protein; COG: COG0560 Phosphoserine phosphatase.
    
 0.910
cdh
Hypothetical protein; KEGG: sec:SC3955 1.9e-112 ushB; CDP-diacylglycerol phosphotidylhydrolase K01521; COG: COG2134 CDP-diacylglycerol pyrophosphatase.
     
  0.900
rodZ
Hypothetical protein; Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis.
  
    0.839
CKO_01034
Hypothetical protein.
       0.773
uvrC
Hypothetical protein; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
     
 0.746
CKO_01031
Hypothetical protein; KEGG: pha:PSHAa1916 3.2e-71 uvrY, sirA; response regulator K07689; COG: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; Psort location: Cytoplasmic, score:9.97.
       0.614
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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