close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01044KEGG: stm:STM1933 2.5e-103 hypothetical protein K01806; COG: COG0698 Ribose 5-phosphate isomerase RpiB; Psort location: Cytoplasmic, score:8.96. (212 aa)    
Predicted Functional Partners:
CKO_00614
Hypothetical protein; KEGG: stt:t0649 1.6e-163 fruK; 1-phosphofructokinase K00882; COG: COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Psort location: Cytoplasmic, score:9.26; Belongs to the carbohydrate kinase PfkB family.
  
  
 0.832
CKO_01748
Hypothetical protein; KEGG: stm:STM1326 2.9e-148 pfkB; 6-phosphofructokinase II K00850; COG: COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Psort location: Cytoplasmic, score:9.26; Belongs to the carbohydrate kinase PfkB family.
  
  
 0.832
CKO_03132
Hypothetical protein; Cleaves 6-deoxy-6-sulfo-D-fructose 1-phosphate (SFP) to form dihydroxyacetone phosphate (DHAP) and 3-sulfolactaldehyde (SLA). Belongs to the aldolase LacD family.
  
  
 0.732
CKO_01045
Hypothetical protein; COG: NOG15359 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
       0.565
CKO_01425
Hypothetical protein; KEGG: ecp:ECP_1403 0. probable pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit.
     
 0.505
CKO_04219
Hypothetical protein; KEGG: ecj:JW2810 3.1e-128 kduD; 2-deoxy-D-gluconate 3-dehydrogenase K00065; COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Psort location: Cytoplasmic, score:9.97.
 
  
 0.492
CKO_04968
Hypothetical protein; KEGG: stm:STM3612 6.6e-151 kdgK; ketodeoxygluconokinase K00874; COG: COG0524 Sugar kinases, ribokinase family.
 
  
 0.486
CKO_02999
Hypothetical protein; KEGG: plu:plu2754 1.0e-28 celA; PTS system, cellobiose-specific IIB component K02760; COG: COG1440 Phosphotransferase system cellobiose-specific component IIB; Psort location: Cytoplasmic, score:9.26.
 
  
 0.475
CKO_01753
Hypothetical protein; KEGG: spt:SPA2884 7.4e-104 kduD; 2-keto-3-deoxygluconate oxidoreductase K00065; COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Psort location: Cytoplasmic, score:9.97.
 
  
 0.469
CKO_00292
Hypothetical protein; KEGG: ssn:SSO_1595 1.2e-220 6-phospho-beta-glucosidase K01223; COG: COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; Psort location: Cytoplasmic, score:9.26; Belongs to the glycosyl hydrolase 1 family.
  
  
 0.444
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.