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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01082Hypothetical protein; COG: COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins. (379 aa)    
Predicted Functional Partners:
CKO_01081
Hypothetical protein; KEGG: eci:UTI89_C4210 2.0e-19 yicJ; hypothetical symporter YicJ K03292; COG: COG2211 Na+/melibiose symporter and related transporters; Psort location: CytoplasmicMembrane, score:10.00.
 
    0.854
CKO_04420
COG: COG4289 Uncharacterized protein conserved in bacteria.
 
     0.731
CKO_02449
COG: COG4289 Uncharacterized protein conserved in bacteria.
 
     0.725
kduI
Hypothetical protein; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
   
 0.669
CKO_03264
Hypothetical protein; KEGG: sde:Sde_0777 2.4e-98 ribosomal protein L11 methyltransferase K01209; COG: COG3940 Predicted beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.534
CKO_04418
Hypothetical protein; KEGG: sgl:SG2119 1.3e-124 putative glucuronyl hydrolase K01238; COG: NOG09941 non supervised orthologous group.
  
     0.504
CKO_02447
Hypothetical protein; KEGG: sgl:SG2119 1.2e-94 putative glucuronyl hydrolase K01238; COG: NOG09941 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
     0.498
flhB
Hypothetical protein; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
       0.435
CKO_01446
Hypothetical protein; COG: COG1434 Uncharacterized conserved protein.
  
     0.434
CKO_00972
Hypothetical protein; KEGG: sbo:SBO_4338 2.2e-166 iucB; siderophore biosynthesis protein K03896; COG: COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.
  
     0.423
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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