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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01092Hypothetical protein; KEGG: hsa:4056 1.3e-05 LTC4S; leukotriene C4 synthase K00807; COG: COG3788 Uncharacterized relative of glutathione S-transferase, MAPEG superfamily; Psort location: CytoplasmicMembrane, score:9.46. (131 aa)    
Predicted Functional Partners:
wzzE
Hypothetical protein; Modulates the polysaccharide chain length of enterobacterial common antigen (ECA); Belongs to the WzzB/Cld/Rol family.
  
     0.708
CKO_01093
Hypothetical protein; COG: COG1801 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96.
     
 0.705
cmoB
Hypothetical protein; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs.
       0.659
CKO_01094
Hypothetical protein; KEGG: eci:UTI89_C2071 1.3e-81 yecD; hypothetical protein; COG: COG1335 Amidases related to nicotinamidase.
     
 0.657
cmoA
Hypothetical protein; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM).
       0.654
wzyE
Hypothetical protein; Probably involved in the polymerization of enterobacterial common antigen (ECA) trisaccharide repeat units; Belongs to the WzyE family.
  
     0.608
CKO_02406
COG: COG3790 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.565
CKO_00501
Hypothetical protein; COG: COG3013 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96; Belongs to the UPF0304 family.
  
     0.518
CKO_01096
Hypothetical protein; KEGG: ecc:c2279 3.9e-66 ntpA; dATP pyrophosphohydrolase K08310; COG: COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Psort location: Cytoplasmic, score:8.96.
 
     0.518
CKO_02682
Hypothetical protein; COG: COG3923 Primosomal replication protein N; Psort location: Cytoplasmic, score:8.96.
  
     0.517
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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