STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01126Hypothetical protein; COG: COG1276 Putative copper export protein; Psort location: CytoplasmicMembrane, score:10.00. (290 aa)    
Predicted Functional Partners:
CKO_01125
COG: COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC; Psort location: Periplasmic, score:9.76.
 
  
 0.949
CKO_01127
Hypothetical protein; COG: NOG09766 non supervised orthologous group.
 
  
 0.949
CKO_04502
Hypothetical protein; COG: NOG11454 non supervised orthologous group.
  
     0.755
CKO_01124
Hypothetical protein; KEGG: spt:SPA0993 1.7e-33 holE; DNA polymerase III, theta subunit K02345; COG: NOG13893 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
     0.752
CKO_01123
Hypothetical protein; KEGG: psp:PSPPH_2956 8.3e-08 hydrolase, carbon-nitrogen family K01950; COG: COG0388 Predicted amidohydrolase.
 
     0.737
CKO_03087
Hypothetical protein; COG: COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein; Psort location: Periplasmic, score:10.00.
 
     0.723
CKO_03626
Hypothetical protein; KEGG: pen:PSEEN0463 0.00012 peptidase, M23/M37 family K01423; COG: COG3061 Cell envelope opacity-associated protein A.
  
     0.717
CKO_00597
Hypothetical protein; COG: NOG14216 non supervised orthologous group.
  
     0.710
CKO_01030
Hypothetical protein; COG: NOG13894 non supervised orthologous group.
  
     0.684
CKO_02321
Hypothetical protein; COG: NOG13870 non supervised orthologous group.
  
     0.684
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.