Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CKO_01158COG: COG4811 Predicted membrane protein. (152 aa)    
Predicted Functional Partners:
CKO_01160
Hypothetical protein; KEGG: eci:UTI89_C2015 1.9e-128 manY; PTS enzyme IIC, mannose-specific K02795; COG: COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; Psort location: CytoplasmicMembrane, score:10.00.
 
    0.778
CKO_01638
Hypothetical protein; COG: NOG08686 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.50.
  
     0.771
CKO_02715
Hypothetical protein; COG: COG4533 ABC-type uncharacterized transport system, periplasmic component; Psort location: Cytoplasmic, score:8.96.
  
     0.761
CKO_04114
Hypothetical protein; KEGG: sfx:S2969 8.2e-169 iap; alkaline phosphatase isozyme conversion, aminopeptidase K01269; COG: COG2234 Predicted aminopeptidases.
  
     0.755
CKO_02150
Hypothetical protein; COG: NOG06195 non supervised orthologous group.
  
     0.750
CKO_02690
Hypothetical protein; COG: NOG09846 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
     0.747
secM
Hypothetical protein; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family.
  
     0.747
CKO_00056
Hypothetical protein; KEGG: sty:STY4228 0.00075 4'-phosphopantetheinyl transferase K06133; COG: COG2091 Phosphopantetheinyl transferase.
  
     0.740
CKO_01159
Hypothetical protein; KEGG: eci:UTI89_C2017 1.2e-144 manZ; PTS enzyme IID, mannose-specific K02796; COG: COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID; Psort location: CytoplasmicMembrane, score:10.00.
 
    0.739
CKO_01988
Hypothetical protein; COG: COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor).
  
     0.738
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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