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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01196Hypothetical protein; COG: COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain; Psort location: CytoplasmicMembrane, score:10.00. (535 aa)    
Predicted Functional Partners:
CKO_01195
Hypothetical protein.
       0.572
CKO_04702
Hypothetical protein; KEGG: gka:GK3448 0.00083 stage V sporulation protein N (L-alanine dehydrogenase K00259; COG: COG0569 K+ transport systems, NAD-binding component; Psort location: Cytoplasmic, score:8.96.
 
   
 0.504
kefC
Hypothetical protein; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport.
     
 0.465
kefB
Hypothetical protein; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport.
     
 0.465
CKO_02671
Hypothetical protein; KEGG: rpa:RPA0846 0.0037 atpB; Fo ATP synthase subunit A K02108; COG: COG1226 Kef-type K+ transport systems, predicted NAD-binding component; Psort location: CytoplasmicMembrane, score:10.00; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
     
 0.407
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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