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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01237Hypothetical protein; KEGG: reh:H16_A2781 1.2e-09 predicted epimerase, PhzC/PhzF homolog; COG: COG0384 Predicted epimerase, PhzC/PhzF homolog; Psort location: Cytoplasmic, score:8.96. (263 aa)    
Predicted Functional Partners:
CKO_01235
Hypothetical protein; KEGG: aci:ACIAD1743 1.6e-108 putative oxydoreductase protein, zinc-containing (quinone oxidoreductase, NADPH dependent) K00345; COG: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases; Psort location: Cytoplasmic, score:8.96.
 
    0.536
CKO_01238
Hypothetical protein; KEGG: ece:Z3022 1.6e-67 yedL; hypothetical protein K03829; COG: COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; Psort location: Cytoplasmic, score:8.96.
       0.474
CKO_01236
Hypothetical protein; KEGG: rpb:RPB_3810 0.00030 dTDP-glucose 4,6-dehydratase K01710; COG: NOG25890 non supervised orthologous group.
       0.454
trpD
Hypothetical protein; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
  
  
 0.426
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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