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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01239Hypothetical protein; KEGG: btk:BT9727_2749 1.2e-14 ribosomal-protein-alanine acetyltransferase K00676; COG: COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; Psort location: Cytoplasmic, score:8.96. (112 aa)    
Predicted Functional Partners:
CKO_01464
Hypothetical protein; KEGG: sbo:SBO_1660 1.8e-70 rimL; acetyl transferase K03817; COG: COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; Psort location: Cytoplasmic, score:9.97.
  
   
 0.619
CKO_01578
Hypothetical protein; KEGG: sec:SC1519 1.5e-91 speG; spermidine N1-acetyltransferase K00657; COG: COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; Psort location: Cytoplasmic, score:8.96.
 
   
 0.614
CKO_00970
Hypothetical protein; KEGG: ssn:SSO_3604 9.3e-200 iucD; lysine:N6-hydroxylase K03897; COG: COG3486 Lysine/ornithine N-monooxygenase; Psort location: CytoplasmicMembrane, score:9.96.
 
  
 0.609
CKO_01996
Hypothetical protein; KEGG: sec:SC1115 3.5e-65 rimJ; acetylation of N-terminal alanine of 30S ribosomal subunit protein S5 K03790; COG: COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.
  
   
 0.531
CKO_01539
Hypothetical protein; KEGG: bme:BMEII0002 7.2e-35 ribosomal-protein-serine acetyltransferase K00680; COG: COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; Psort location: Cytoplasmic, score:8.96.
  
   
 0.408
CKO_01238
Hypothetical protein; KEGG: ece:Z3022 1.6e-67 yedL; hypothetical protein K03829; COG: COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; Psort location: Cytoplasmic, score:8.96.
  
  
 0.403
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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