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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01247Hypothetical protein; KEGG: eci:UTI89_C2184 0. irp1; HMWP1 nonribosomal peptide/polyketide synthase K04786; COG: COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases. (3163 aa)    
Predicted Functional Partners:
CKO_01246
Hypothetical protein; COG: COG4693 Oxidoreductase (NAD-binding), involved in siderophore biosynthesis.
 
     0.947
CKO_01245
Hypothetical protein; KEGG: eci:UTI89_C2186 2.1e-138 ybtT; YbtT protein K05374; COG: COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis.
 
  
 0.944
CKO_01244
Hypothetical protein; KEGG: yps:YPTB1592 7.4e-278 ybtE, irp5; yersiniabactin siderophore biosynthetic protein K04783; COG: COG1021 Peptide arylation enzymes; Psort location: Cytoplasmic, score:9.26.
 
     0.856
CKO_01243
Hypothetical protein; COG: COG1629 Outer membrane receptor proteins, mostly Fe transport; Psort location: OuterMembrane, score:10.00.
 
     0.823
CKO_00863
Hypothetical protein; KEGG: ecp:ECP_1976 3.3e-37 putative D-alanyl carrier protein K03367; Psort location: Cytoplasmic, score:8.96.
 
 
 0.822
CKO_01249
Hypothetical protein; KEGG: bur:Bcep18194_C7173 1.1e-06 two component transcriptional regulator, AraC family; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:8.96.
 
     0.780
CKO_00907
Hypothetical protein; KEGG: eci:UTI89_C2186 2.1e-138 ybtT; YbtT protein K05374; COG: COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis.
 
  
 0.775
CKO_00908
Hypothetical protein; KEGG: bme:BMEII1126 0.0097 oxidoreductase K00100; COG: COG4693 Oxidoreductase (NAD-binding), involved in siderophore biosynthesis.
 
     0.775
CKO_00873
Hypothetical protein; KEGG: eci:UTI89_C2210 0. putative peptide synthetase K03367; COG: COG1020 Non-ribosomal peptide synthetase modules and related proteins; Psort location: Cytoplasmic, score:9.97; Belongs to the ATP-dependent AMP-binding enzyme family.
  
     0.771
CKO_00876
Hypothetical protein; KEGG: eci:UTI89_C2207 9.8e-102 putative thioesterase K01076; COG: COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis; Psort location: Cytoplasmic, score:8.96.
 
  
 0.769
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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