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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01281Hypothetical protein; COG: COG0387 Ca2+/H+ antiporter; Psort location: CytoplasmicMembrane, score:10.00. (366 aa)    
Predicted Functional Partners:
CKO_04778
KEGG: ssn:SSO_3489 0. yhfK; hypothetical protein K01823; COG: COG1289 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.663
CKO_00315
Hypothetical protein; COG: NOG13899 non supervised orthologous group.
  
     0.658
CKO_00776
COG: COG1289 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.657
CKO_01280
Hypothetical protein.
       0.572
CKO_01282
Hypothetical protein; COG: COG4572 Putative cation transport regulator.
     
 0.533
mdtA
COG: COG0845 Membrane-fusion protein; Psort location: CytoplasmicMembrane, score:8.02; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
    0.511
CKO_04018
Hypothetical protein; COG: NOG09772 non supervised orthologous group.
  
     0.472
CKO_03087
Hypothetical protein; COG: COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein; Psort location: Periplasmic, score:10.00.
  
    0.469
CKO_03265
Hypothetical protein; KEGG: eci:UTI89_C0119 2.4e-130 ampE; AmpE K03807; COG: COG3725 Membrane protein required for beta-lactamase induction; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.469
CKO_00223
Hypothetical protein; COG: COG0560 Phosphoserine phosphatase.
  
     0.462
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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