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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01296Hypothetical protein; KEGG: eci:UTI89_C1417 3.1e-105 narL; NarL transcriptional dual regulator K07684; COG: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; Psort location: Cytoplasmic, score:9.97. (216 aa)    
Predicted Functional Partners:
CKO_01297
Hypothetical protein; KEGG: sec:SC1760 1.1e-292 narX; sensory histidine kinase in two component regulatory system with NarL, senses nitrate/nitrite, regulates anaerobic respiration and fermentation K07673; COG: COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific; Psort location: CytoplasmicMembrane, score:9.82.
 
 0.998
CKO_00321
Hypothetical protein; KEGG: stt:t0379 4.2e-268 narQ; nitrate/nitrite sensor protein K07674; COG: COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific; Psort location: CytoplasmicMembrane, score:9.97.
 
 0.986
CKO_04139
Hypothetical protein; KEGG: spt:SPA2823 0. barA; sensor protein; COG: COG0784 FOG: CheY-like receiver; Psort location: CytoplasmicMembrane, score:9.99.
 
 
 0.963
CKO_04368
Hypothetical protein; KEGG: sbo:SBO_2396 2.5e-190 evgS, evgA; putative sensor for regulator EvgA K07679; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: CytoplasmicMembrane, score:9.82.
   
 
0.868
CKO_02817
Hypothetical protein; KEGG: ece:Z0462 4.2e-236 putative sensor kinase; hexosephosphate transport K07675; COG: COG3851 Signal transduction histidine kinase, glucose-6-phosphate specific; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.836
CKO_04614
Hypothetical protein; KEGG: sec:SC3266 0. arcB; aerobic respiration control sensor protein K07648; COG: COG0784 FOG: CheY-like receiver; Psort location: CytoplasmicMembrane, score:9.97.
 
 
 0.778
CKO_00007
Hypothetical protein; KEGG: stm:STM3789 1.8e-253 uhpB; sensory histidine kinase in two-component regulatory sytem with UhpA K07675; COG: COG3851 Signal transduction histidine kinase, glucose-6-phosphate specific; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.678
CKO_03799
Hypothetical protein; KEGG: bur:Bcep18194_A5728 7.7e-38 two component transcriptional regulator, winged helix family; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score:9.97.
  
 
   0.605
CKO_03790
Hypothetical protein; KEGG: psp:PSPPH_3276 1.4e-71 sensory box sensor histidine kinase/response regulator; COG: COG0784 FOG: CheY-like receiver; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 
 0.600
rcsC
Hypothetical protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.
 
 
 
 0.574
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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