Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CKO_01331Hypothetical protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. (179 aa)    
Predicted Functional Partners:
CKO_01332
Hypothetical protein; COG: NOG06197 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:10.00.
  
    0.931
CKO_01330
Hypothetical protein; KEGG: stm:STM1736 6.6e-64 yciA; putative acyl-CoA thioester hydrolase K01076; COG: COG1607 Acyl-CoA hydrolase.
       0.621
ftsH
Hypothetical protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
      
 0.476
CKO_02153
Hypothetical protein; KEGG: lpn:lpg1920 2.0e-14 lpxK; tetraacyldisaccharide-1-P-4'-kinase K00912; COG: COG2835 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96; Belongs to the UPF0434 family.
  
     0.469
secY
Hypothetical protein; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
      
 0.445
msrB
Hypothetical protein; KEGG: ecc:c2183 2.4e-73 yeaA; peptide methionine sulfoxide reductase MsrB K07305; COG: COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; Psort location: Cytoplasmic, score:8.96.
  
    0.405
trpC
Hypothetical protein; KEGG: sfx:S1351 2.8e-214 trpC; N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase K01609:K01817; COG: COG0134 Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.
       0.403
CKO_01333
COG: COG3047 Outer membrane protein W; Psort location: OuterMembrane, score:10.00.
       0.402
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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