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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01392COG: COG3768 Predicted membrane protein. (353 aa)    
Predicted Functional Partners:
CKO_01391
Hypothetical protein; KEGG: eci:UTI89_C1592 1.3e-243 ycjX; hypothetical protein YcjX; COG: COG3106 Predicted ATPase; Psort location: Cytoplasmic, score:8.96.
 
  
 0.994
CKO_01393
Hypothetical protein; KEGG: eci:UTI89_C2502 1.4e-52 atoC; acetoacetate metabolism regulatory protein AtoC K07714; COG: COG3283 Transcriptional regulator of aromatic amino acids metabolism; Psort location: Cytoplasmic, score:8.96.
   
 0.723
CKO_03401
Hypothetical protein; KEGG: ece:Z5988 8.8e-101 putative lipoate-protein ligase A K03800:K07186; COG: COG3726 Uncharacterized membrane protein affecting hemolysin expression.
  
     0.710
CKO_00231
Hypothetical protein; KEGG: ecp:ECP_2558 8.9e-227 putative sensor-like histidine kinase YfhK K07711; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.679
CKO_01389
Hypothetical protein; COG: COG1983 Putative stress-responsive transcriptional regulator.
 
   
 0.678
CKO_04637
Hypothetical protein; KEGG: eco:b3233 1.1e-63 yhcB; hypothetical protein K00424; COG: COG3105 Uncharacterized protein conserved in bacteria.
  
     0.671
CKO_01390
Hypothetical protein; COG: NOG14121 non supervised orthologous group.
     
 0.618
CKO_02987
COG: COG3068 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.96.
  
     0.605
CKO_01388
Hypothetical protein; COG: NOG14122 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
   
 0.587
CKO_02105
Hypothetical protein; KEGG: eci:UTI89_C1028 0. helD; DNA helicase IV K03658; COG: COG0210 Superfamily I DNA and RNA helicases; Psort location: Cytoplasmic, score:8.96.
  
     0.587
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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