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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01401Hypothetical protein; COG: COG2866 Predicted carboxypeptidase. (242 aa)    
Predicted Functional Partners:
CKO_04193
Hypothetical protein; COG: COG2165 Type II secretory pathway, pseudopilin PulG.
  
     0.667
CKO_01197
Hypothetical protein; KEGG: ecc:c1641 1.0e-131 ldcA; muramoyltetrapeptide carboxypeptidase K01297; COG: COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF.
    
 0.662
CKO_04645
Hypothetical protein; COG: COG2732 Barstar, RNAse (barnase) inhibitor; Psort location: Cytoplasmic, score:8.96.
  
     0.656
wecH
Hypothetical protein; Responsible for the incorporation of O-acetyl groups into the enterobacterial common antigen (ECA) trisaccharide repeat units.
  
     0.614
CKO_01400
Hypothetical protein; KEGG: sdy:SDY_1403 7.8e-148 ycjG; putative muconate cycloisomerase I; COG: COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily.
     
 0.612
CKO_04018
Hypothetical protein; COG: NOG09772 non supervised orthologous group.
  
     0.612
CKO_02109
Hypothetical protein; COG: COG3070 Regulator of competence-specific genes.
  
     0.596
rcsF
Hypothetical protein; Essential component of the Rcs signaling system, which controls transcription of numerous genes. Plays a role in signal transduction from the cell surface to the histidine kinase RcsC. May detect outer membrane defects; Belongs to the RcsF family.
  
     0.595
CKO_01402
Hypothetical protein; KEGG: shn:Shewana3_2650 1.1e-20 acetate kinase K00925; COG: COG4166 ABC-type oligopeptide transport system, periplasmic component; Psort location: Periplasmic, score:10.00.
  
  
 0.569
CKO_05010
Hypothetical protein; COG: NOG06217 non supervised orthologous group.
  
     0.551
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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