STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01438Hypothetical protein; KEGG: eco:b1406 1.7e-127 ydbC; predicted oxidoreductase, NAD(P)-binding; COG: COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases); Psort location: Cytoplasmic, score:8.96. (289 aa)    
Predicted Functional Partners:
CKO_00372
Hypothetical protein; KEGG: stm:STM2435 8.1e-130 pdxK; pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase K00868; COG: COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase; Psort location: Cytoplasmic, score:8.96.
     
 0.920
pdxY
Hypothetical protein; Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP.
     
 0.920
pdxH
Hypothetical protein; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
     
 0.906
CKO_04407
Hypothetical protein; KEGG: eco:b3012 9.1e-138 dkgA, yqhE; 2,5-diketo-D-gluconate reductase A K06221; COG: COG0656 Aldo/keto reductases, related to diketogulonate reductase; Psort location: Cytoplasmic, score:8.96.
 
 
 0.601
CKO_01435
Hypothetical protein; COG: NOG06225 non supervised orthologous group.
       0.505
CKO_01436
Hypothetical protein; COG: NOG17319 non supervised orthologous group.
       0.505
CKO_01437
COG: COG3784 Uncharacterized protein conserved in bacteria.
       0.505
CKO_02976
Hypothetical protein; KEGG: stm:STM0255 1.2e-128 yafB; 2,5-diketo-D-gluconate reductase B K06222; COG: COG0656 Aldo/keto reductases, related to diketogulonate reductase; Psort location: Cytoplasmic, score:8.96.
 
 
0.458
CKO_01425
Hypothetical protein; KEGG: ecp:ECP_1403 0. probable pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit.
  
  
 0.419
CKO_01094
Hypothetical protein; KEGG: eci:UTI89_C2071 1.3e-81 yecD; hypothetical protein; COG: COG1335 Amidases related to nicotinamidase.
 
    0.400
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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