node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKO_01440 | CKO_02162 | CKO_01440 | CKO_02162 | Hypothetical protein; KEGG: eci:UTI89_C1635 0. hrpA; ATP-dependent helicase HrpA K03578; COG: COG1643 HrpA-like helicases; Psort location: CytoplasmicMembrane, score:9.27. | Hypothetical protein; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.943 |
CKO_01440 | CKO_02632 | CKO_01440 | CKO_02632 | Hypothetical protein; KEGG: eci:UTI89_C1635 0. hrpA; ATP-dependent helicase HrpA K03578; COG: COG1643 HrpA-like helicases; Psort location: CytoplasmicMembrane, score:9.27. | Hypothetical protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.670 |
CKO_01440 | CKO_04785 | CKO_01440 | CKO_04785 | Hypothetical protein; KEGG: eci:UTI89_C1635 0. hrpA; ATP-dependent helicase HrpA K03578; COG: COG1643 HrpA-like helicases; Psort location: CytoplasmicMembrane, score:9.27. | Hypothetical protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.670 |
CKO_01440 | deaD | CKO_01440 | CKO_04559 | Hypothetical protein; KEGG: eci:UTI89_C1635 0. hrpA; ATP-dependent helicase HrpA K03578; COG: COG1643 HrpA-like helicases; Psort location: CytoplasmicMembrane, score:9.27. | Hypothetical protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.660 |
CKO_01440 | fusA | CKO_01440 | CKO_04746 | Hypothetical protein; KEGG: eci:UTI89_C1635 0. hrpA; ATP-dependent helicase HrpA K03578; COG: COG1643 HrpA-like helicases; Psort location: CytoplasmicMembrane, score:9.27. | Hypothetical protein; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.716 |
CKO_01440 | rnd | CKO_01440 | CKO_01177 | Hypothetical protein; KEGG: eci:UTI89_C1635 0. hrpA; ATP-dependent helicase HrpA K03578; COG: COG1643 HrpA-like helicases; Psort location: CytoplasmicMembrane, score:9.27. | Hypothetical protein; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family. | 0.856 |
CKO_01440 | rpsD | CKO_01440 | CKO_04709 | Hypothetical protein; KEGG: eci:UTI89_C1635 0. hrpA; ATP-dependent helicase HrpA K03578; COG: COG1643 HrpA-like helicases; Psort location: CytoplasmicMembrane, score:9.27. | Hypothetical protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.907 |
CKO_01440 | rpsE | CKO_01440 | CKO_04716 | Hypothetical protein; KEGG: eci:UTI89_C1635 0. hrpA; ATP-dependent helicase HrpA K03578; COG: COG1643 HrpA-like helicases; Psort location: CytoplasmicMembrane, score:9.27. | Hypothetical protein; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.802 |
CKO_01440 | rpsQ | CKO_01440 | CKO_04725 | Hypothetical protein; KEGG: eci:UTI89_C1635 0. hrpA; ATP-dependent helicase HrpA K03578; COG: COG1643 HrpA-like helicases; Psort location: CytoplasmicMembrane, score:9.27. | Hypothetical protein; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.667 |
CKO_01440 | tmcA | CKO_01440 | CKO_00313 | Hypothetical protein; KEGG: eci:UTI89_C1635 0. hrpA; ATP-dependent helicase HrpA K03578; COG: COG1643 HrpA-like helicases; Psort location: CytoplasmicMembrane, score:9.27. | Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). | 0.737 |
CKO_02162 | CKO_01440 | CKO_02162 | CKO_01440 | Hypothetical protein; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Hypothetical protein; KEGG: eci:UTI89_C1635 0. hrpA; ATP-dependent helicase HrpA K03578; COG: COG1643 HrpA-like helicases; Psort location: CytoplasmicMembrane, score:9.27. | 0.943 |
CKO_02162 | CKO_02632 | CKO_02162 | CKO_02632 | Hypothetical protein; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Hypothetical protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.624 |
CKO_02162 | CKO_04785 | CKO_02162 | CKO_04785 | Hypothetical protein; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Hypothetical protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.563 |
CKO_02162 | deaD | CKO_02162 | CKO_04559 | Hypothetical protein; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Hypothetical protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.612 |
CKO_02162 | fusA | CKO_02162 | CKO_04746 | Hypothetical protein; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Hypothetical protein; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.909 |
CKO_02162 | rnd | CKO_02162 | CKO_01177 | Hypothetical protein; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Hypothetical protein; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family. | 0.966 |
CKO_02162 | rpsD | CKO_02162 | CKO_04709 | Hypothetical protein; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Hypothetical protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.998 |
CKO_02162 | rpsE | CKO_02162 | CKO_04716 | Hypothetical protein; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Hypothetical protein; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.996 |
CKO_02162 | rpsQ | CKO_02162 | CKO_04725 | Hypothetical protein; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Hypothetical protein; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.993 |
CKO_02162 | tmcA | CKO_02162 | CKO_00313 | Hypothetical protein; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). | 0.984 |