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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01455Hypothetical protein; KEGG: stm:STM1627 7.5e-198 alcohol dehydrogenase class III K00001:K00121; COG: COG1062 Zn-dependent alcohol dehydrogenases, class III; Psort location: Cytoplasmic, score:9.97; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (372 aa)    
Predicted Functional Partners:
CKO_00636
Hypothetical protein; Serine hydrolase involved in the detoxification of formaldehyde.
 0.999
CKO_01318
Hypothetical protein; KEGG: stm:STM1749 0. adhE; alcohol dehydrogenase / acetaldehyde dehydrogenase K00001:K04072; COG: COG1012 NAD-dependent aldehyde dehydrogenases; Psort location: Cytoplasmic, score:9.26; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.979
CKO_03534
Hypothetical protein; KEGG: eci:UTI89_C4876 3.3e-172 yjgB; putative oxidoreductase K00100; COG: COG1064 Zn-dependent alcohol dehydrogenases.
  
 
0.967
CKO_04377
Hypothetical protein; KEGG: pfl:PFL_2420 1.3e-131 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00002; COG: COG1064 Zn-dependent alcohol dehydrogenases; Psort location: Cytoplasmic, score:8.96.
  
 
0.967
CKO_01454
COG: COG1937 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.96.
 
  
 0.965
CKO_00342
Hypothetical protein; KEGG: eci:UTI89_C2777 1.7e-182 eutG, yffV; ethanolamine utilization protein EutG iron-containing alcohol dehydrogenase K04022; COG: COG1454 Alcohol dehydrogenase, class IV; Psort location: Cytoplasmic, score:9.26.
   
 0.964
CKO_03104
Hypothetical protein; KEGG: stm:STM4044 2.5e-190 putative alcohol dehydrogenase K00001; COG: COG1454 Alcohol dehydrogenase, class IV; Psort location: Cytoplasmic, score:9.26.
   
 0.964
CKO_05045
Hypothetical protein; KEGG: ecc:c4410 1.9e-183 yiaY; probable alcohol dehydrogenase K00001; COG: COG1454 Alcohol dehydrogenase, class IV; Psort location: Cytoplasmic, score:9.26.
   
 0.964
CKO_05043
Hypothetical protein; KEGG: stm:STM3680 5.6e-273 aldB; aldehyde dehydrogenase B K00138; COG: COG1012 NAD-dependent aldehyde dehydrogenases; Psort location: Cytoplasmic, score:9.26.
  
 0.917
rcnR
Hypothetical protein; Repressor of rcnA expression. Acts by binding specifically to the rcnA promoter in the absence of nickel and cobalt. In the presence of one of these metals, it has a weaker affinity for rcnA promoter (By similarity); Belongs to the FrmR/RcnR family.
 
  
 0.869
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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