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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01460Hypothetical protein; KEGG: stm:STM1623 3.9e-240 putative carboxylesterase K03927; COG: COG2272 Carboxylesterase type B; Belongs to the type-B carboxylesterase/lipase family. (509 aa)    
Predicted Functional Partners:
CKO_04114
Hypothetical protein; KEGG: sfx:S2969 8.2e-169 iap; alkaline phosphatase isozyme conversion, aminopeptidase K01269; COG: COG2234 Predicted aminopeptidases.
  
 0.876
rpsD
Hypothetical protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
    
  0.833
CKO_01461
Hypothetical protein.
       0.773
gmk
Hypothetical protein; Essential for recycling GMP and indirectly, cGMP.
  
 0.749
CKO_01459
COG: COG5383 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.96.
       0.740
rnd
Hypothetical protein; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family.
    
  0.730
mdoD
Hypothetical protein; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs).
     
 0.615
CKO_01449
Hypothetical protein; KEGG: eca:ECA2408 9.0e-99 paeX; pectin acetylesterase; COG: COG0657 Esterase/lipase.
 
  
 0.606
CKO_01440
Hypothetical protein; KEGG: eci:UTI89_C1635 0. hrpA; ATP-dependent helicase HrpA K03578; COG: COG1643 HrpA-like helicases; Psort location: CytoplasmicMembrane, score:9.27.
    
 0.566
CKO_03221
Hypothetical protein; KEGG: eci:UTI89_C0162 0. hrpB; ATP-dependent helicase HrpB K03579; COG: COG1643 HrpA-like helicases.
    
 0.566
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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