STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01476Hypothetical protein; COG: COG1598 Uncharacterized conserved protein. (138 aa)    
Predicted Functional Partners:
CKO_01475
Hypothetical protein; COG: NOG34613 non supervised orthologous group.
   
 
 0.977
CKO_04304
Hypothetical protein; COG: COG3722 Transcriptional regulator.
  
     0.680
CKO_01474
Hypothetical protein.
       0.623
CKO_01477
Hypothetical protein; KEGG: eci:UTI89_C1658 5.5e-218 ydcR; hypothetical protein YdcR K00811; COG: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; Psort location: Cytoplasmic, score:9.26.
       0.610
CKO_01694
Hypothetical protein; Psort location: Cytoplasmic, score:8.96.
  
     0.603
CKO_02318
Hypothetical protein; COG: NOG10254 non supervised orthologous group.
  
     0.532
CKO_01473
Hypothetical protein; KEGG: eco:b1435 0. ydcP; putative protease K08303; COG: COG0826 Collagenase and related proteases; Psort location: Cytoplasmic, score:8.96.
       0.510
CKO_01697
Hypothetical protein; COG: NOG06203 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
     0.481
CKO_01936
Hypothetical protein; KEGG: eci:UTI89_C1243 2.7e-161 ycfT; hypothetical protein K00680; COG: COG4763 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.447
CKO_04799
Hypothetical protein; KEGG: eci:UTI89_C3877 3.2e-135 yhfV; phosphotriesterase-like protein; COG: COG1735 Predicted metal-dependent hydrolase with the TIM-barrel fold; Psort location: Cytoplasmic, score:8.96.
  
   
 0.426
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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