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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01484COG: COG4457 Uncharacterized protein conserved in bacteria, putative virulence factor. (993 aa)    
Predicted Functional Partners:
CKO_01485
Hypothetical protein; KEGG: mag:amb3277 9.8e-09 RTX toxins and related Ca2+-binding protein K00754; COG: NOG35976 non supervised orthologous group.
  
 0.990
CKO_01483
COG: COG4458 Uncharacterized protein conserved in bacteria, putative virulence factor; Psort location: Cytoplasmic, score:8.96.
 
  
 0.966
CKO_01482
Hypothetical protein.
       0.773
CKO_03684
Hypothetical protein; COG: COG2771 DNA-binding HTH domain-containing proteins.
  
     0.705
CKO_01989
Hypothetical protein; COG: COG3418 Flagellar biosynthesis/type III secretory pathway chaperone.
  
     0.675
CKO_02607
Hypothetical protein; KEGG: dre:562769 1.9e-06 LOC562769; similar to Serine/threonine-protein kinase 10 (Lymphocyte-oriented kinase) K08837; COG: COG1076 DnaJ-domain-containing proteins 1; Psort location: Cytoplasmic, score:8.96.
  
     0.643
CKO_02805
Hypothetical protein; KEGG: eci:UTI89_C0334 7.5e-56 hypothetical protein; COG: COG3468 Type V secretory pathway, adhesin AidA.
  
     0.642
CKO_00018
Hypothetical protein; KEGG: bja:blr3367 3.7e-07 probable cellulase K01179; COG: NOG14136 non supervised orthologous group; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.571
fliT
Hypothetical protein; Dual-function protein that regulates the transcription of class 2 flagellar operons and that also acts as an export chaperone for the filament-capping protein FliD. As a transcriptional regulator, acts as an anti-FlhDC factor; it directly binds FlhC, thus inhibiting the binding of the FlhC/FlhD complex to class 2 promoters, resulting in decreased expression of class 2 flagellar operons. As a chaperone, effects FliD transition to the membrane by preventing its premature polymerization, and by directing it to the export apparatus.
  
     0.557
CKO_05056
Hypothetical protein; COG: COG3722 Transcriptional regulator; Psort location: Cytoplasmic, score:8.96.
  
     0.538
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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