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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01485Hypothetical protein; KEGG: mag:amb3277 9.8e-09 RTX toxins and related Ca2+-binding protein K00754; COG: NOG35976 non supervised orthologous group. (443 aa)    
Predicted Functional Partners:
CKO_01484
COG: COG4457 Uncharacterized protein conserved in bacteria, putative virulence factor.
  
 0.990
CKO_01483
COG: COG4458 Uncharacterized protein conserved in bacteria, putative virulence factor; Psort location: Cytoplasmic, score:8.96.
 
  
 0.967
CKO_01482
Hypothetical protein.
       0.773
CKO_03684
Hypothetical protein; COG: COG2771 DNA-binding HTH domain-containing proteins.
  
     0.763
CKO_02607
Hypothetical protein; KEGG: dre:562769 1.9e-06 LOC562769; similar to Serine/threonine-protein kinase 10 (Lymphocyte-oriented kinase) K08837; COG: COG1076 DnaJ-domain-containing proteins 1; Psort location: Cytoplasmic, score:8.96.
  
     0.749
CKO_02805
Hypothetical protein; KEGG: eci:UTI89_C0334 7.5e-56 hypothetical protein; COG: COG3468 Type V secretory pathway, adhesin AidA.
  
     0.740
CKO_01989
Hypothetical protein; COG: COG3418 Flagellar biosynthesis/type III secretory pathway chaperone.
  
     0.721
CKO_00018
Hypothetical protein; KEGG: bja:blr3367 3.7e-07 probable cellulase K01179; COG: NOG14136 non supervised orthologous group; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.694
CKO_03593
Hypothetical protein; KEGG: eco:b4236 1.5e-41 cybC; cytochrome b562, truncated (pseudogene); COG: COG3783 Soluble cytochrome b562; Psort location: Periplasmic, score:9.76.
  
   
 0.638
CKO_00246
Hypothetical protein; COG: COG3683 ABC-type uncharacterized transport system, periplasmic component.
  
     0.618
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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