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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01489COG: COG3238 Uncharacterized protein conserved in bacteria; Psort location: CytoplasmicMembrane, score:9.46. (149 aa)    
Predicted Functional Partners:
CKO_01490
Hypothetical protein; KEGG: ecj:JW5233 8.2e-82 yncA; predicted acyltransferase with acyl-CoA N-acyltransferase domain K03823; COG: COG1247 Sortase and related acyltransferases; Psort location: Cytoplasmic, score:8.96.
 
     0.823
pyrE
Hypothetical protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
  
 0.776
CKO_01465
Hypothetical protein; KEGG: bfl:Bfl281 6.5e-05 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536; COG: NOG06285 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
     0.761
pyrF
Hypothetical protein; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
  
    0.760
CKO_01491
Hypothetical protein; KEGG: psp:PSPPH_2917 3.1e-09 DNA-binding protein K00517; COG: COG1396 Predicted transcriptional regulators.
 
    0.716
damX
Hypothetical protein; Non-essential cell division protein.
  
     0.699
CKO_00327
Hypothetical protein; COG: NOG10065 non supervised orthologous group.
  
     0.698
pyrD
Hypothetical protein; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
    0.698
CKO_02362
Hypothetical protein; KEGG: stm:STM0786 7.0e-211 ybhC; putative pectinesterase K01051; COG: COG4677 Pectin methylesterase.
  
     0.668
CKO_04096
Hypothetical protein; COG: NOG14130 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
     0.642
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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