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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01490Hypothetical protein; KEGG: ecj:JW5233 8.2e-82 yncA; predicted acyltransferase with acyl-CoA N-acyltransferase domain K03823; COG: COG1247 Sortase and related acyltransferases; Psort location: Cytoplasmic, score:8.96. (172 aa)    
Predicted Functional Partners:
CKO_01489
COG: COG3238 Uncharacterized protein conserved in bacteria; Psort location: CytoplasmicMembrane, score:9.46.
 
     0.823
ureA
Hypothetical protein; KEGG: ece:Z1143 6.1e-45 ureA; putative urease structural subunit A (gamma) K01430; COG: COG0831 Urea amidohydrolase (urease) gamma subunit; Belongs to the urease gamma subunit family.
  
    0.647
CKO_01491
Hypothetical protein; KEGG: psp:PSPPH_2917 3.1e-09 DNA-binding protein K00517; COG: COG1396 Predicted transcriptional regulators.
       0.614
ureD
Hypothetical protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
  
    0.568
CKO_01492
Hypothetical protein; KEGG: spt:SPA1279 3.0e-171 yncB; putative NADP-dependent oxidoreductase; COG: COG2130 Putative NADP-dependent oxidoreductases; Psort location: Cytoplasmic, score:8.96.
       0.510
CKO_04620
Hypothetical protein; KEGG: sbo:SBO_3170 0. gltB; glutamate synthase, large subunit K00265; COG: COG0069 Glutamate synthase domain 2; Psort location: Cytoplasmic, score:8.96.
 
   
 0.465
cobB
Hypothetical protein; KEGG: ssn:SSO_1140 2.5e-119 cobB; putative nicotinic acid mononucleotide:5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferase K01463; COG: COG0846 NAD-dependent protein deacetylases, SIR2 family; Psort location: Cytoplasmic, score:8.96; Belongs to the sirtuin family. Class III subfamily.
  
  
 0.421
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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