STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01519Hypothetical protein; KEGG: pfl:PFL_0043 2.4e-43 osmC; hydroperoxide resistance protein OsmC K04063; COG: COG1764 Predicted redox protein, regulator of disulfide bond formation. (143 aa)    
Predicted Functional Partners:
CKO_04019
Hypothetical protein; COG: COG4575 Uncharacterized conserved protein.
  
    0.840
dps
Hypothetical protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction.
 
  
 0.801
CKO_03416
Hypothetical protein; KEGG: hin:HI0574 0.0062 fkpA; probable fkbp-type peptidyl-prolyl cis-trans isomerase (PPIase) (ROTAMase) K03772; COG: COG2823 Predicted periplasmic or secreted lipoprotein; Psort location: Periplasmic, score:10.00.
   
  
 0.793
CKO_03869
COG: COG3237 Uncharacterized protein conserved in bacteria; Belongs to the UPF0337 (CsbD) family.
 
  
 0.743
CKO_00524
Hypothetical protein; COG: COG4575 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96.
   
  
 0.622
CKO_01749
Hypothetical protein; COG: NOG12163 non supervised orthologous group.
   
    0.613
otsA
Hypothetical protein; Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family.
  
    0.598
CKO_02016
Hypothetical protein; COG: NOG09842 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
   
    0.587
CKO_04500
Hypothetical protein; KEGG: tma:TM1614 0.0016 ATP synthase F0, subunit b K02109; COG: COG4575 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96.
   
  
 0.587
CKO_01764
Hypothetical protein; COG: NOG09763 non supervised orthologous group.
   
  
 0.563
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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