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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01526Hypothetical protein; KEGG: bam:Bamb_0825 0.0062 glucokinase K00845; COG: COG1737 Transcriptional regulators. (288 aa)    
Predicted Functional Partners:
ddpX
Hypothetical protein; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
 
     0.805
CKO_01524
Hypothetical protein; KEGG: shn:Shewana3_2650 1.0e-35 acetate kinase K00925; COG: COG0747 ABC-type dipeptide transport system, periplasmic component; Psort location: Periplasmic, score:9.76.
 
     0.768
CKO_01523
Hypothetical protein; KEGG: rha:RHA1_ro09047 1.3e-42 ABC peptide transporter, permease component K02033; COG: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
      0.674
CKO_03719
Hypothetical protein; COG: COG1737 Transcriptional regulators.
  
     0.661
CKO_01520
Hypothetical protein; KEGG: reh:H16_A1304 3.2e-64 ABC-type transporter, ATPase component: PepT family; COG: COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Psort location: Cytoplasmic, score:9.12.
  
    0.645
CKO_01521
Hypothetical protein; KEGG: reh:H16_B1125 2.3e-70 ABC-type transporter, ATPase component: PepT family; COG: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
       0.631
CKO_01522
Hypothetical protein; COG: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
       0.585
CKO_00898
Hypothetical protein; COG: NOG17192 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
     0.524
CKO_02229
Hypothetical protein; KEGG: rme:Rmet_2422 0.0046 peptidase S1C, Do K04771; COG: COG3031 Type II secretory pathway, component PulC; Psort location: CytoplasmicMembrane, score:9.82.
  
     0.522
CKO_01527
Hypothetical protein.
       0.474
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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