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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01531COG: COG3550 Uncharacterized protein related to capsule biosynthesis enzymes. (422 aa)    
Predicted Functional Partners:
CKO_01530
Hypothetical protein; KEGG: psp:PSPPH_2917 0.0052 DNA-binding protein K00517; COG: NOG18342 non supervised orthologous group.
 
 
 0.968
CKO_03107
Hypothetical protein; KEGG: psp:PSPPH_2917 9.5e-09 DNA-binding protein K00517; COG: COG1396 Predicted transcriptional regulators; Psort location: Cytoplasmic, score:8.96.
 
 
 0.697
CKO_00635
Hypothetical protein; COG: COG1396 Predicted transcriptional regulators; Psort location: Cytoplasmic, score:8.96.
  
 
 0.621
CKO_00698
Hypothetical protein; COG: COG1396 Predicted transcriptional regulators.
  
 
 0.590
CKO_01472
Hypothetical protein; KEGG: mmo:MMOB3450 0.0020 dam; adenine-specific DNA methyltransferase K06223; COG: COG1396 Predicted transcriptional regulators.
  
 
 0.590
CKO_01491
Hypothetical protein; KEGG: psp:PSPPH_2917 3.1e-09 DNA-binding protein K00517; COG: COG1396 Predicted transcriptional regulators.
  
 
 0.590
CKO_01905
Hypothetical protein; COG: NOG36342 non supervised orthologous group.
  
 
 0.590
CKO_02597
Hypothetical protein; COG: COG1396 Predicted transcriptional regulators; Psort location: Cytoplasmic, score:8.96.
  
 
 0.590
CKO_03396
Hypothetical protein; KEGG: stm:STM4580.S 1.5e-217 nadR; nicotinamide-nucleotide adenylyltransferase K00952:K06210:K06211; COG: COG3172 Predicted ATPase/kinase involved in NAD metabolism; Psort location: Cytoplasmic, score:8.96.
  
 
 0.590
CKO_01528
Hypothetical protein; KEGG: vfi:VFA0360 4.3e-16 sensory transduction protein kinase; COG: COG0840 Methyl-accepting chemotaxis protein; Psort location: CytoplasmicMembrane, score:10.00.
       0.443
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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