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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01532Hypothetical protein; KEGG: eci:UTI89_C1705 4.4e-170 yddW; hypothetical lipoprotein YddW precursor K01189; COG: COG1649 Uncharacterized protein conserved in bacteria. (365 aa)    
Predicted Functional Partners:
CKO_01876
Hypothetical protein; KEGG: ecc:c1436 2.4e-75 probable lysozyme from lambdoid prophage Qin K01185; COG: COG3772 Phage-related lysozyme (muraminidase).
  
     0.455
CKO_00239
Hypothetical protein; KEGG: eci:UTI89_C2868 0. yphG; hypothetical protein YphG K00754; COG: NOG06209 non supervised orthologous group; Psort location: OuterMembrane, score:9.49.
  
  
 0.417
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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