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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
marCHypothetical protein; COG: COG2095 Multiple antibiotic transporter; Psort location: CytoplasmicMembrane, score:10.00. (221 aa)    
Predicted Functional Partners:
CKO_01551
KEGG: ppr:PBPRA0481 6.9e-06 hypothetical transcriptional regulator, MarR family K03828; COG: COG1846 Transcriptional regulators; Psort location: Cytoplasmic, score:8.96.
     
 0.505
CKO_01549
Hypothetical protein.
       0.459
CKO_01552
Hypothetical protein; KEGG: bat:BAS3585 1.9e-09 Ada regulatory protein/6-O-methylguanine-DNA methyltransferase K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:9.97.
     
 0.443
CKO_02686
Hypothetical protein; KEGG: cal:orf19.4683 1.0e-06 MLP1; myosin-like protein involved in translocation of macromolecules between the nucleoplasm and the NPC K01553; COG: COG3264 Small-conductance mechanosensitive channel; Psort location: CytoplasmicMembrane, score:10.00.
  
    0.428
CKO_03675
Hypothetical protein; KEGG: rno:113960 5.0e-08 Cdc42bpb; Cdc42 binding protein kinase beta K08286; COG: COG3264 Small-conductance mechanosensitive channel; Psort location: CytoplasmicMembrane, score:10.00.
  
    0.428
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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