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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01558Hypothetical protein; KEGG: pen:PSEEN4892 1.4e-95 branched-chain amino acid ABC transporter, ATP-binding protein; COG: COG0410 ABC-type branched-chain amino acid transport systems, ATPase component; Psort location: Cytoplasmic, score:9.12. (232 aa)    
Predicted Functional Partners:
CKO_01560
Hypothetical protein; KEGG: reh:H16_A3653 1.1e-14 ABC-type transporter, ATPase and permease components; COG: COG4177 ABC-type branched-chain amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.996
CKO_01561
Hypothetical protein; KEGG: fal:FRAAL3359 1.8e-13 putative sulfate-transporting ATPase K06020; COG: COG0559 Branched-chain amino acid ABC-type transport system, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.994
CKO_01562
Hypothetical protein; COG: COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component; Psort location: Periplasmic, score:9.76.
 
 
 0.991
CKO_01559
Hypothetical protein; KEGG: pen:PSEEN4891 6.1e-93 branched-chain amino acid transport ABC transporter, ATP-binding component; COG: COG4674 Uncharacterized ABC-type transport system, ATPase component.
 
 
0.971
CKO_02934
Hypothetical protein; KEGG: reh:H16_A3653 2.0e-28 ABC-type transporter, ATPase and permease components; COG: COG4177 ABC-type branched-chain amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
  
 0.920
CKO_04878
Hypothetical protein; KEGG: reh:H16_A3653 1.1e-22 ABC-type transporter, ATPase and permease components; COG: COG4177 ABC-type branched-chain amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
  
 0.915
CKO_02933
Hypothetical protein; KEGG: rha:RHA1_ro10323 9.5e-26 ABC branched chain amino acid transporter ATP-binding subunit; COG: COG0559 Branched-chain amino acid ABC-type transport system, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.823
CKO_04879
Hypothetical protein; KEGG: rha:RHA1_ro10323 8.5e-27 ABC branched chain amino acid transporter ATP-binding subunit; COG: COG0559 Branched-chain amino acid ABC-type transport system, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.800
CKO_02935
Hypothetical protein; KEGG: reh:H16_A3027 4.6e-79 livG2; ABC-type transporter, ATPase component: HAAT family; COG: COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
  
0.752
CKO_04877
Hypothetical protein; KEGG: pen:PSEEN1283 1.6e-94 livG; branched-chain amino acid ABC transporter, ATP-binding protein; COG: COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
  
0.744
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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