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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01567Hypothetical protein; KEGG: pab:PAB0087 2.5e-23 pbp; related beta-lactamase precursor K01467; COG: COG1680 Beta-lactamase class C and other penicillin binding proteins; Psort location: Periplasmic, score:9.44. (392 aa)    
Predicted Functional Partners:
CKO_01566
Hypothetical protein.
       0.572
CKO_02606
Hypothetical protein; KEGG: dra:DRA0202 0.00030 superoxide dismutase (sodC), Cu-Zn family K04565; COG: COG3391 Uncharacterized conserved protein.
  
     0.564
CKO_04920
Hypothetical protein; KEGG: vfi:VF0856 3.6e-17 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000; COG: NOG17954 non supervised orthologous group.
  
     0.553
CKO_01538
Hypothetical protein; KEGG: btl:BALH_1861 5.7e-10 acetyltransferase, GNAT family K00680; COG: COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
  
    0.521
CKO_02575
Hypothetical protein; KEGG: stm:STM0588 0. entF; enterobactin synthetase, component F (nonribosomal peptide synthetase) K02364; COG: COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases; Psort location: CytoplasmicMembrane, score:8.46.
  
  
 0.476
CKO_00902
Hypothetical protein; COG: NOG11459 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
     0.471
CKO_01565
Hypothetical protein; KEGG: bpm:BURPS1710b_A1493 1.8e-20 GGDEF domain protein; COG: COG2199 FOG: GGDEF domain; Psort location: Cytoplasmic, score:8.96.
       0.468
CKO_04918
Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
  
 0.415
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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