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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01570Hypothetical protein; KEGG: msm:MSMEG_3400 1.9e-07 glutamyl-tRNA(Gln) amidotransferase subunit A K01957; COG: COG1802 Transcriptional regulators; Psort location: Cytoplasmic, score:8.96. (228 aa)    
Predicted Functional Partners:
CKO_03396
Hypothetical protein; KEGG: stm:STM4580.S 1.5e-217 nadR; nicotinamide-nucleotide adenylyltransferase K00952:K06210:K06211; COG: COG3172 Predicted ATPase/kinase involved in NAD metabolism; Psort location: Cytoplasmic, score:8.96.
   
  
 0.676
uxuA-2
Hypothetical protein; Catalyzes the dehydration of D-mannonate.
 
   
 0.650
prmB
Hypothetical protein; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.
    
   0.619
CKO_00095
Hypothetical protein; KEGG: reh:H16_A3019 0.0056 hutC; histidine utilization repressor; COG: COG2186 Transcriptional regulators; Psort location: Cytoplasmic, score:8.96.
  
  
 0.606
CKO_04011
Hypothetical protein; KEGG: msm:MSMEG_3400 4.3e-06 glutamyl-tRNA(Gln) amidotransferase subunit A K01957; COG: COG1802 Transcriptional regulators.
  
     0.594
CKO_03300
Hypothetical protein; KEGG: eci:UTI89_C0086 3.5e-81 ilvH; acetolactate synthase III, valine sensitive, small subunit K01653; COG: COG0440 Acetolactate synthase, small (regulatory) subunit; Psort location: Cytoplasmic, score:8.96.
   
    0.560
CKO_01569
Hypothetical protein; KEGG: eci:UTI89_C1762 2.1e-124 ydfG; probable oxidoreductase YdfG; COG: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; Psort location: Cytoplasmic, score:9.26; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.558
CKO_04496
Hypothetical protein; KEGG: eci:UTI89_C1658 7.7e-06 ydcR; hypothetical protein YdcR K00811; COG: COG2186 Transcriptional regulators; Psort location: Cytoplasmic, score:8.96.
  
  
 0.546
CKO_05060
Hypothetical protein; KEGG: eci:UTI89_C3030 4.2e-06 hypothetical protein K00375; COG: COG2186 Transcriptional regulators; Psort location: Cytoplasmic, score:8.96.
  
  
 0.546
uxuA
Hypothetical protein; Catalyzes the dehydration of D-mannonate.
 
   
 0.538
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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