STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01572Hypothetical protein; KEGG: ecc:c1968 1.7e-223 ydfI; hypothetical oxidoreductase YdfI; COG: COG0246 Mannitol-1-phosphate/altronate dehydrogenases. (490 aa)    
Predicted Functional Partners:
CKO_01575
Hypothetical protein; KEGG: eci:UTI89_C1768 8.7e-220 rspA; starvation sensing protein RspA K08323; COG: COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Psort location: Cytoplasmic, score:8.96.
 
  
 0.955
uxuA
Hypothetical protein; Catalyzes the dehydration of D-mannonate.
 
 
 0.950
uxuA-2
Hypothetical protein; Catalyzes the dehydration of D-mannonate.
 
 
 0.943
CKO_01574
Hypothetical protein; KEGG: stm:STM1506 7.5e-159 rspB; putative dehydrogenase K08322; COG: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; Psort location: Cytoplasmic, score:9.26.
    
 0.937
uxaC
KEGG: sha:SH2648 7.1e-131 hypothetical protein K01812; COG: COG1904 Glucuronate isomerase; Psort location: Cytoplasmic, score:8.96.
 
 
 0.937
uxaC-2
Hypothetical protein; KEGG: ecc:c3850 1.5e-256 uxaC; uronate isomerase K01812; COG: COG1904 Glucuronate isomerase.
 
 
 0.936
CKO_05054
Hypothetical protein; KEGG: stm:STM3685 0. mtlA; PTS family, mannitol-specific enzyme IIABC components K02798:K02799:K02800; COG: COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain; Psort location: CytoplasmicMembrane, score:10.00.
  
  
 0.911
CKO_03733
Hypothetical protein; KEGG: ecc:c1968 7.5e-214 ydfI; hypothetical oxidoreductase YdfI; COG: COG0246 Mannitol-1-phosphate/altronate dehydrogenases; Psort location: Cytoplasmic, score:8.96.
  
  
 
0.900
CKO_03583
Hypothetical protein; KEGG: spk:MGAS9429_Spy1126 9.9e-32 PTS system, mannitol (cryptic)-specific IIA component K00890; COG: COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain; Psort location: CytoplasmicMembrane, score:9.82.
  
  
 0.873
CKO_00613
Hypothetical protein; KEGG: stt:t0650 4.0e-183 fruB; fructose-specific IIA/FPR component of PTS system K02768:K02784; COG: COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain; Psort location: Cytoplasmic, score:9.97.
  
  
 0.634
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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