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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01617Hypothetical protein; COG: COG3136 Uncharacterized membrane protein required for alginate biosynthesis; Psort location: CytoplasmicMembrane, score:9.46. (111 aa)    
Predicted Functional Partners:
CKO_00056
Hypothetical protein; KEGG: sty:STY4228 0.00075 4'-phosphopantetheinyl transferase K06133; COG: COG2091 Phosphopantetheinyl transferase.
  
     0.635
CKO_02303
Hypothetical protein; KEGG: eci:UTI89_C0819 3.0e-249 ybiP; hypothetical protein YbiP K00924; COG: COG2194 Predicted membrane-associated, metal-dependent hydrolase; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.631
rcnA
Hypothetical protein; Efflux system for nickel and cobalt.
  
     0.593
CKO_01619
Hypothetical protein; KEGG: spt:SPA1384 1.1e-203 rstB; two component sensor kinase K07639; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:10.00.
 
     0.582
CKO_01080
Hypothetical protein; COG: NOG12148 non supervised orthologous group.
  
     0.571
CKO_00277
Hypothetical protein; KEGG: aha:AHA_1764 2.7e-12 ubiquitin ligase sinat5 K01932; COG: NOG17950 non supervised orthologous group.
  
     0.560
CKO_01618
Hypothetical protein; KEGG: bur:Bcep18194_A5728 8.9e-37 two component transcriptional regulator, winged helix family; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score:9.26.
       0.552
CKO_01657
COG: COG1289 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.544
CKO_01848
Hypothetical protein; COG: NOG11915 non supervised orthologous group; Psort location: OuterMembrane, score:9.49.
  
     0.516
CKO_01651
Hypothetical protein; COG: COG3895 Predicted periplasmic protein.
  
     0.504
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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